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A Transcriptomic Analysis of Phenotypic Plasticity in Crassostrea virginica Larvae under Experimental Acidification

Citation: Barbosa M, Schwaner C, Pales Espinosa E, Allam B. A Transcriptomic Analysis of Phenotypic Plasticity in Crassostrea virginica Larvae under Experimental Acidification. Genes. 2022; 13(9):1529. https://doi.org/10.3390/genes13091529

Ocean acidification (OA) is a major threat to marine calcifiers, and little is known regarding acclimation to OA in bivalves. This study combined physiological assays with next-generation sequencing to assess the potential for recovery from and acclimation to OA in the eastern oyster (Crassostrea virginica) and identify molecular mechanisms associated with resilience. In a reciprocal transplant experiment, larvae transplanted from elevated pCO2 (~1400 ppm) to ambient pCO2 (~350 ppm) demonstrated significantly lower mortality and larger size post-transplant than oysters remaining under elevated pCO2 and had similar mortality compared to those remaining in ambient conditions. The recovery after transplantation to ambient conditions demonstrates the ability for larvae to rebound and suggests phenotypic plasticity and acclimation. Transcriptomic analysis supported this hypothesis as genes were differentially regulated under OA stress. Transcriptomic profiles of transplanted and non-transplanted larvae terminating in the same final pCO2 converged, further supporting the idea that acclimation underlies resilience. The functions of differentially expressed genes included cell differentiation, development, biomineralization, ion exchange, and immunity. Results suggest acclimation as a mode of resilience to OA. In addition, the identification of genes associated with resilience can serve as a valuable resource for the aquaculture industry, as these could enable marker-assisted selection of OA-resilient stocks.

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ADAPTING TO OCEAN ACIDIFICATION

The NOAA Ocean Acidification Program (OAP) works to prepare society to adapt to the consequences of ocean acidification and conserve marine ecosystems as acidification occurs. Learn more about the human connections and adaptation strategies from these efforts.

Adaptation approaches fostered by the OAP include:

FORECASTING

Using models and research to understand the sensitivity of organisms and ecosystems to ocean acidification to make predictions about the future, allowing communities and industries to prepare

MANAGEMENT

Using these models and predictions as tools to facilitate management strategies that will protect marine resources and communities from future changes

TECHNOLOGY DEVELOPMENT

Developing innovative tools to help monitor ocean acidification and mitigate changing ocean chemistry locally

REDUCING OUR CARBON FOOTPRINT

50 more ways to reduce your carbon footprint >

On the Road

Drive fuel-efficient vehicles or choose public transportation. Choose your bike or walk! Don't sit idle for more than 30 seconds. Keep your tires properly inflated.

With your Food Choices

Eat local- this helps cut down on production and transport! Reduce your meat and dairy. Compost to avoid food waste ending up in the landfill

With your Food Choices

Make energy-efficient choices for your appliances and lighting. Heat and cool efficiently! Change your air filters and program your thermostat, seal and insulate your home, and support clean energy sources

By Reducing Coastal Acidification

Reduce your use of fertilizers, Improve sewage treatment and run off, and Protect and restore coastal habitats

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TAKE ACTION WITH YOUR COMMUNITY

You've taken the first step to learn more about ocean acidification - why not spread this knowledge to your community?

Every community has their unique culture, economy and ecology and what’s at stake from ocean acidification may be different depending on where you live.  As a community member, you can take a larger role in educating the public about ocean acidification. Creating awareness is the first step to taking action.  As communities gain traction, neighboring regions that share marine resources can build larger coalitions to address ocean acidification.  Here are some ideas to get started:

  1. Work with informal educators, such as aquarium outreach programs and local non-profits, to teach the public about ocean acidification. Visit our Education & Outreach page to find the newest tools!
  2. Participate in habitat restoration efforts to restore habitats that help mitigate the effects of coastal acidification
  3. Facilitate conversations with local businesses that might be affected by ocean acidification, building a plan for the future.
  4. Partner with local community efforts to mitigate the driver behind ocean acidification  – excess CO2 – such as community supported agriculture, bike & car shares and other public transportation options.
  5. Contact your regional Coastal Acidification Network (CAN) to learn how OA is affecting your region and more ideas about how you can get involved in your community
       More for Taking Community Action